Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs9768304 | chr7:65054016 | T/C | RABGEF1 | chr7:66147151-66276451:+ | 0.51 | 6.64 | 8.71E-11 | Box Plot |
| THCA | rs976900 | chr8:58553324 | T/C | JPH3 | chr16:87635441-87731762:+ | 0.3 | 6.12 | 2.0E-9 | Box Plot |
| THCA | rs9775370 | chr9:100661367 | G/A | FAM81A | chr15:59664892-59815748:+ | -0.25 | -6.01 | 3.68E-9 | Box Plot |
| THCA | rs978145 | chr5:113066085 | G/C | DOCK6 | chr19:11309971-11373157:- | -0.35 | -5.91 | 6.49E-9 | Box Plot |
| THCA | rs978802 | chr8:11343278 | A/T | SGK223 | chr8:8175258-8244008:- | 0.38 | 6.97 | 1.07E-11 | Box Plot |
| THCA | rs978803 | chr8:11343475 | C/T | SGK223 | chr8:8175258-8244008:- | -0.38 | -6.95 | 1.19E-11 | Box Plot |
| THCA | rs978804 | chr8:11343673 | C/T | SGK223 | chr8:8175258-8244008:- | 0.38 | 6.97 | 1.08E-11 | Box Plot |
| THCA | rs979191 | chr21:18932755 | G/C | CXADRP3 | chr18:14477954-14499277:- | -0.6 | -8.25 | 1.55E-15 | Box Plot |
| THCA | rs9792166 | chr8:11306974 | G/C | SGK223 | chr8:8175258-8244008:- | -0.34 | -6.2 | 1.21E-9 | Box Plot |
| THCA | rs9792227 | chr8:11302833 | C/A | SGK223 | chr8:8175258-8244008:- | -0.39 | -7.44 | 4.84E-13 | Box Plot |
| THCA | rs9792357 | chr8:10322724 | T/C | SGK223 | chr8:8175258-8244008:- | -0.4 | -6.38 | 4.28E-10 | Box Plot |
| THCA | rs9799070 | chr3:90400831 | G/A | STX19 | chr3:93733213-93747454:- | 0.48 | 6.89 | 1.76E-11 | Box Plot |
| THCA | rs9799179 | chr3:90414184 | C/A | STX19 | chr3:93733213-93747454:- | 0.46 | 6.63 | 9.32E-11 | Box Plot |
| THCA | rs9815733 | chr3:125771580 | T/G | ROPN1 | chr3:123687368-123711025:- | 0.33 | 5.92 | 6.25E-9 | Box Plot |
| THCA | rs9815750 | chr3:125771644 | T/C | ROPN1 | chr3:123687368-123711025:- | 0.33 | 5.92 | 6.25E-9 | Box Plot |